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Gold nano systems for the detection of molecules using surface-enhanced Raman scattering (SERS)
Benešová, Markéta ; Bernatová,, Silvie (referee) ; Skoumalová, Petra (advisor)
This diploma thesis was focused on the production and use of gold nanosystems to enhance Raman scattering. Metal nanoparticles, when interacting with electromagnetic radiation, form so-called localized plasmons, which can enhance Raman scattering. SERS (surface-enhanced Raman scattering) is a non-destructive analytical technique used in this work to measure the concentration and chemical changes in the rhodamine B molecule. Rhodamine B was subjected to photocatalytic degradation using two types of photocatalysts before measurement: TiO2-(H) and TiO2-(H)-Ag. The quantitative dependence of rhodamine B photodegradation on the presence of photocatalysts in a given period time was sought using photodegradation processes. The results of measurements using the SERS method were compared with the results obtained by UV-VIS spectroscopy. From the measured data, it was found that the photocatalysts significantly accelerate the photodegradation processes, because the Raman signal of rhodamine B decreased, while the signal decrease was most pronounced for the catalyst with added TiO2-(H)-Ag, less prominent but still statistically significant signal decrease was observed for the TiO2-(H) catalyst. In the control sample without the addition of photocatalyst, no decrease in signal was observed. In the next phase of the thesis, a sandwich immunoassay was designed that uses SERS to detect E. coli bacteria or other specific microorganisms in the sample. The first component of the sandwich immunoassay is gold nanoparticles, which carry a so-called Raman reporter, which has a clear Raman response in the spectrum, and gold nanoparticles amplify this signal, and antibodies, thanks to which the particles specifically bind to the microorganism. Another component is either gold layered slides or magnetic nanoparticles, which are modified with antibodies and serve to immobilize microorganisms. This system can be a fast and very accurate way to identify a given microorganism in a sample.
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Analysis of biological significant substances
Maděránková, Denisa ; Rychtárik, Milan (referee) ; Roleček, Jiří (advisor)
Selected methods of Raman spectroscopy, like surface-enhanced Raman spectroscopy and single molecule Raman spectroscopy, are described in this diploma work. The basis of two methods for numerical modelling of optical properties of micro- and nanoparticles are prefaced. The methods are Discrete Dipole Approximation and Finite Difference Time Domain. Micro- and nanoparticles are used in surface enhanced Raman spectroscopy and other nanospectroscopic methods. Further, the main instrumentation needed for Raman spectroscopy is described. The first part of experimental section of this work is numerical modelling of photonic nanojet that occures behind dielectric microparticles. This phenomenon leads to a new technique of confocal microscopy with Raman spectra measuring. The second experimental section contains results of Raman spectra measurement with beta-carotene and surface-enhanced Raman spectra of beta-carotene in silver-sol solution.
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Fabrication and application of graphene-metal heterostructure in biosensing by Surface Enhenced Raman Spectroscopy
Hegrová, Veronika ; Édes, Zoltán (referee) ; Konečný, Martin (advisor)
This thesis deals with fabrication of graphene/metal heterostructures and their application in biosensing by surface-enhanced Raman spectroscopy. The heterostructures are fabricated by selective deposition of gold colloidal nanoparticles onto silicon substrate, where the termination of both the gold colloidal solution and the silicon surface is controlled. Further, the assembled gold colloids are overlaid by graphene monolayer. The experiments have proved, that it is possible to observe the presence of biomolecules at very low concentrations if the parameters of graphene/metal heterostructures are well selected. The combination of both graphene and metal SERS properties have demonstrated their appropriateness for utilization in bisensing.
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Deposition and characterization of GaN nanocrystals with a metal core
Čalkovský, Vojtěch ; Čech, Vladimír (referee) ; Mach, Jindřich (advisor)
Tato diplomova prace se zabyva prpravou a charakterizac GaN nanokrystalu s kovovym jadrem. V teoreticke casti teto prace je predstaven material GaN se svymi vlastnos- tmi a aplikacemi. Dale jsou uvedeny substraty pro rust a jednotlive mechanismy rustu GaN nanokrystalu. V dalsm jsou popsany kovove nanocastice a jejich opticke vlastnosti umoznujc zesilovan fotoluminiscence na zaklade interakce plasmonu a GaN. Experi- mentaln cast se zabyva prpravou GaN nanokrystalu s Ag jadrem ve ctyrech krocch. Prvne jsou Ag nanocastice naneseny na substrat Si(111). Nasledne se nechaj zoxidovat. Tretm krokem je depozice Ga a poslednm je nitridace. Jednotlive kroky byly opti- malizovany a analyzovany ruznymi metodami, jako je XPS, SEM, fotoluminiscence a Ramanova spektroskopie.
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The deposition of Ga and GaN nanostructures on silicon and graphene substrate
Mareš, Petr ; Hospodková,, Alice (referee) ; Mach, Jindřich (advisor)
Presented thesis is focused on the study of properties of Ga and GaN nanostructures on graphene. In the theoretical part of the thesis a problematics of graphene and GaN fabrication is discussed with a focus on the relation of Ga and GaN to graphene. The experimental part of the thesis deals with the depositions of Ga on transferred CVD-graphene on SiO2. The samples are analyzed by various methods (XPS, AFM, SEM, Raman spectroscopy, EDX). The properties of Ga on graphene are discussed with a focus on the surface enhanced Raman scattering effect. Furthermore, a deposition of Ga on exfoliated graphene and on graphene on a copper foil is described. GaN is fabricated by nitridation of the Ga structures on graphene. This process is illustrated by the XPS measurements of a distinct Ga peak and the graphene valence band during the process of nitridation.
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The deposition of Ga and GaN nanostructures with metal core
Čalkovský, Martin ; Jarý,, Vítězslav (referee) ; Mach, Jindřich (advisor)
The presented thesis deals with preparation of GaN nanocrystals with a metal core. In the theoretical part of the thesis GaN with its properties and applications is introduced. Further, some of the preparation methods of GaN are presented, mainly focusing on MBE growth. Deposition of metal NPs from colloidal solution and the state of the art approaches to enhance luminescence of GaN based structures is discussed. The experimental part follows three steps of preparation of GaN crystals with the Ag core. In the first step the Ag NPs are deposited on the Si(111) substrate. In the second step the Ga deposition process is optimized and in the third step the deposited Ga is transformed into GaN. After the Ga deposition the samples were analyzed by SEM/EDX and SAM/AES. The properties of prepared GaN crystals with the Ag core were studied by XPS, photoluminescence and Raman spectroscopy.
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SERS-TAGS: Selective immobilization and detection of bacteria using specific antibodies and surface-enhanced Raman scattering
Benešová, Markéta ; Bernatová, Silvie ; Samek, Ota ; Pokorná, Zuzana ; Mika, Filip ; Kizovský, Martin ; Pilát, Zdeněk
Raman spectroscopy is a non-destructive instrumental analytical technique based on Raman scattering, which is the inelastic scattering of photons that occurs when interacting with electrons in chemical bonds. With the help of Raman spectroscopy, chemical compounds, their mixtures and biological samples, including living organisms, can be analyzed very quickly, non-contactly and non-destructively. The performed measurements can be compared with spectra databases. A problem with Raman spectroscopy is that samples sometimes give a weak signal that is often overlaid by intense fluorescence. SERS (surface-enhanced Raman spectroscopy) is used to amplify Raman scattering.
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New pathways to plasmonic nanoparticle assembling into 2D and 3D hybrid active systems for SERS of graphene and SERS, SERRS and GERS + SERS of aromatic molecules
Gajdošová, Veronika ; Vlčková, Blanka (advisor) ; Němec, Ivan (referee) ; Michl, Martin (referee)
In the first part of the Thesis, a new type of active system for SERS and SERRS of hydrophobic molecules, namely a 3-dimensional (3D) nanosponge aggregate with incorporated hydrophobic molecules has been developed, and tested by fullerene C60 and hydrophobic free- base tetraphenylporfine (H2TPP). The SERS and SERRS (surface enhanced /resonance/ Raman scattering) limits of detection (LODs) of C60 at four excitation wavelengths spanning the visible spectral region were found to be by one order of magnitude lower than in the reference system, which mimics the previously reported ways of utilization of Ag nanosponges as substrates for SERS and SERRS. The superiority of the newly developed sample is attributed to the efficient localization of the hydrophobic molecules into hot spots in 2D fractal aggregates of Ag nanoparticles (NPs). Diprotonation of H2TPP during the procedure using HCl as the preaggregation agent has been eliminated by employment of NaCl. On the other hand, investigation of the mechanism of H2TPP protonation during the former preparation procedure opened a possibility to employ Ag nanosponge aggregate as nanoreactor. In the second part of the Thesis, 2D assemblies of AgNPs were found to be better substrates for SERS of single layer graphene (SLG) than the 3D ones. In particular, the 2D...
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Gold nano systems for the detection of molecules using surface-enhanced Raman scattering (SERS)
Benešová, Markéta ; Bernatová,, Silvie (referee) ; Skoumalová, Petra (advisor)
This diploma thesis was focused on the production and use of gold nanosystems to enhance Raman scattering. Metal nanoparticles, when interacting with electromagnetic radiation, form so-called localized plasmons, which can enhance Raman scattering. SERS (surface-enhanced Raman scattering) is a non-destructive analytical technique used in this work to measure the concentration and chemical changes in the rhodamine B molecule. Rhodamine B was subjected to photocatalytic degradation using two types of photocatalysts before measurement: TiO2-(H) and TiO2-(H)-Ag. The quantitative dependence of rhodamine B photodegradation on the presence of photocatalysts in a given period time was sought using photodegradation processes. The results of measurements using the SERS method were compared with the results obtained by UV-VIS spectroscopy. From the measured data, it was found that the photocatalysts significantly accelerate the photodegradation processes, because the Raman signal of rhodamine B decreased, while the signal decrease was most pronounced for the catalyst with added TiO2-(H)-Ag, less prominent but still statistically significant signal decrease was observed for the TiO2-(H) catalyst. In the control sample without the addition of photocatalyst, no decrease in signal was observed. In the next phase of the thesis, a sandwich immunoassay was designed that uses SERS to detect E. coli bacteria or other specific microorganisms in the sample. The first component of the sandwich immunoassay is gold nanoparticles, which carry a so-called Raman reporter, which has a clear Raman response in the spectrum, and gold nanoparticles amplify this signal, and antibodies, thanks to which the particles specifically bind to the microorganism. Another component is either gold layered slides or magnetic nanoparticles, which are modified with antibodies and serve to immobilize microorganisms. This system can be a fast and very accurate way to identify a given microorganism in a sample.
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